STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0308_0017Putative Sec61/secY. (472 aa)    
Predicted Functional Partners:
Esi_0184_0026
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.990
Esi_0026_0025
Ribosomal protein L35, isoform CRA_b.
  
 
 0.989
Esi_0033_0018
Putative ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.988
Esi_0073_0071
KH type-2 domain-containing protein.
  
 
 0.988
Esi_0103_0025
Uncharacterized protein.
  
 
 0.988
Esi_0062_0008
Ribosomal_L18_c domain-containing protein.
  
 
 0.988
Esi_0064_0104
Uncharacterized protein.
   
 0.984
Esi_0091_0005
Ribosomal protein L24.
  
 
 0.983
Esi_0092_0010
Ribosomal_L2_C domain-containing protein.
  
 
 0.981
rpl24
50S ribosomal protein L24, chloroplastic; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
  
 
 0.980
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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