STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAN1C1-2alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (944 aa)    
Predicted Functional Partners:
Esi_0193_0021
Vacuolar sorting receptor, putative (ISS).
    
 0.645
Esi_0062_0101
PA domain-containing protein.
    
 0.645
Esi_0002_0227
Uncharacterized protein.
   
 
 0.613
Esi_0130_0015
Calnexin.
   
 
 0.578
Pdi3
Protein disulfide-isomerase.
    
 
 0.462
Pdi6
Protein disulfide isomerase.
    
 
 0.462
Esi_0454_0014
Thioredoxin domain-containing protein.
    
 
 0.462
Pdi6-2
Protein disulfide isomerase.
    
 
 0.462
SBP2
SECIS binding protein 2.
    
 
 0.462
Pdi5
Protein disulfide-isomerase fusion protein; Belongs to the protein disulfide isomerase family.
    
 
 0.462
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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