STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0032_0056Uncharacterized protein. (1018 aa)    
Predicted Functional Partners:
Esi_0229_0023
UBX domain-containing protein.
    
  0.733
Esi_0062_0113
Uncharacterized protein.
   
 
  0.522
Esi_0036_0093
UBX domain-containing protein.
    
  0.510
VDAC
Voltage dependent anion channel.
     
 0.482
Esi_0122_0039
Ubiquitinyl hydrolase 1.
     
 0.479
Esi_0124_0076
USP domain-containing protein.
     
 0.479
Esi_0058_0019
Ubiquitin carboxyl-terminal hydrolase.
     
 0.479
Esi_0150_0046
Uncharacterized protein.
    
  0.477
Esi_0013_0071
Similar to ubiquitin and ribosomal protein S27a.
    
  0.477
Esi_0070_0049
Ubiquitin.
    
  0.477
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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