STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0032_0068Uncharacterized protein. (1216 aa)    
Predicted Functional Partners:
Esi_0229_0023
UBX domain-containing protein.
   
 0.963
Esi_0347_0025
annotation not available
   
 0.886
Esi_0211_0012
Uncharacterized protein.
   
 0.835
Esi_0071_0018
PUB domain, zinc finger protein Thioredoxin.
    
 0.814
Esi_0179_0060
DEAD box helicase.
  
   0.800
Esi_0063_0053
Uncharacterized protein.
   
  
 0.800
Esi_0141_0065
MI domain-containing protein.
   
    0.785
Esi_0041_0124
Uncharacterized protein.
    
 0.747
Esi_0070_0117
NPL4 domain-containing protein.
    
 0.747
Esi_0138_0011
Brix domain containing 1.
   
 
 0.732
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.