STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0032_0130XPA_C domain-containing protein. (124 aa)    
Predicted Functional Partners:
Esi_0185_0042
DEAD box helicase similar to CG7922-PA.
    
 0.991
Esi_0121_0017
Helicase ATP-binding domain-containing protein.
    
 0.988
Esi_0058_0001
Uncharacterized protein.
    
 0.980
Esi_0151_0057
TFIIH subunit (Partial).
    
 0.977
Esi_0105_0023
ERCC4 domain-containing protein.
    
 0.972
Esi_0012_0116
Uncharacterized protein.
    
 0.943
Esi_0052_0103
EsV-1-66.
    
 0.943
Esi_0115_0040
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.935
Esi_0533_0015
ERCC4 domain containing protein.
    
 0.928
Esi_0006_0201
ERCC4 domain containing protein.
    
 0.928
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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