STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0338_0009Peptide chain release factor 1. (448 aa)    
Predicted Functional Partners:
rpl27
50S ribosomal protein L27, chloroplastic.
  
 
 0.910
Esi_0120_0053
Uncharacterized protein.
   
 
 0.895
rpl31
50S ribosomal protein L31, chloroplastic; Binds the 23S rRNA.
  
 
 0.881
rpl36
50S ribosomal protein L36, chloroplastic.
  
 
 0.873
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.838
Esi_0047_0056
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.838
Esi_0026_0025
Ribosomal protein L35, isoform CRA_b.
   
 
 0.827
Esi_0073_0071
KH type-2 domain-containing protein.
  
 
 0.820
Esi_0184_0026
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.819
Esi_0045_0045
Uncharacterized protein.
  
 
 0.817
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.