STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0034_0078DOT1 domain-containing protein. (463 aa)    
Predicted Functional Partners:
Esi_0435_0001
Uncharacterized protein.
   
 0.763
CDK
Possible Cdc2-related protein kinase.
   
 0.763
Esi_0000_0259
Uncharacterized protein.
    
 0.756
Esi_0059_0077
Histone H3; Belongs to the histone H3 family.
   
 0.752
Esi_0033_0106
Histone domain-containing protein.
   
 0.752
Esi_0057_0055
Histone H3; Belongs to the histone H3 family.
   
 0.752
Esi_0057_0060
Similar to histone H3.2.
   
 0.752
Esi_0131_0084
Histone H3, putative.
   
 0.752
Esi_0015_0026
Histone H3; Belongs to the histone H3 family.
   
 0.752
Esi_0095_0013
Fe2OG dioxygenase domain-containing protein.
   
 0.752
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.