STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0035_0031THUMP domain-containing protein. (549 aa)    
Predicted Functional Partners:
Esi_0028_0029
C2 domain-containing protein.
   
 0.969
Esi_0043_0130
Similar to past-1.
   
 0.969
Esi_0044_0141
Uncharacterized protein.
   
 0.969
Esi_0066_0106
Uncharacterized protein.
   
 0.969
SCA1
SCAR-WAVE.
   
 0.950
Esi_0141_0068
Uncharacterized protein.
   
 0.930
Esi_0038_0016
tRNA_int_endo domain-containing protein.
    
   0.909
RAC
RAC, RHO family GTPase.
    
 0.867
Esi_0101_0029
Uncharacterized protein.
    
 0.793
Esi_0002_0184
Hypothetical leucine rich repeat protein.
    
 0.682
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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