STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0035_0093Lactoylglutathione lyase, putative. (357 aa)    
Predicted Functional Partners:
NUOI
NUOI homolog, NADH dehydrogenase (Ubiquinone) subunit.
  
 
 0.884
Esi_0036_0051
Tryptophan synthase (Alpha / beta chains).
  
  0.854
Esi_0060_0108
Tryptophan synthase (Alpha / beta chains).
  
  0.854
GATase1_DJ-1
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative.
  
 
 0.776
IGPS
Indole-3-glycerol-phosphate synthase.
    
 0.775
IGPS-2
annotation not available
    
 0.775
Esi_0281_0043
Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (C-terminal).
    
 0.775
Esi_0281_0044
Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (N-terminal).
    
 0.775
GLURS
Glutamyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  0.771
SDH3
SDH3, succinate dehydrogenase subunit 3.
  
  
 0.757
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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