STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0379_0012Uncharacterized protein. (566 aa)    
Predicted Functional Partners:
HPPD
4-hydroxyphenylpyruvate dioxygenase, plastid.
  
 0.979
Esi_0188_0001
Fumarylacetoacetate (FAA) hydrolase, putative.
  
  
 0.904
GST-6
Putative Glutathione S-transferase; Belongs to the GST superfamily.
  
 
 0.814
EEF1Bgamma
Eukaryotic elongation factor-1 B gamma.
  
 
 0.814
Esi_0087_0036
Heme peroxidase-related protein.
  
  
 0.678
Esi_0210_0006
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.678
Esi_0086_0074
Similar to 2-Epi-5-Epi-Valiolone Synthase (Sedoheptulose 7-Phosphate Cyclase).
     
 0.666
Esi_0013_0196
3-Dehydroquinate Synthase.
     
 0.666
Esi_0137_0084
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
     
 0.666
DHQ-SDH
Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase.
     
 0.666
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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