STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0399_0013Phosphodiesterase. (1233 aa)    
Predicted Functional Partners:
Esi_0115_0013
PPM-type phosphatase domain-containing protein.
   
 0.799
Esi_0156_0039
Uncharacterized protein.
   
 0.799
Esi_0177_0058
PPM-type phosphatase domain-containing protein.
   
 0.799
Esi_0242_0025
PPM-type phosphatase domain-containing protein.
   
 0.799
Esi_0089_0015
PPM-type phosphatase domain-containing protein.
   
 0.799
PKG-lb
Putative PKG-Ib.
   
 0.799
Esi_0120_0074
AAA domain-containing protein.
    
 0.746
Esi_0003_0011
Ubiquitin-conjugating enzyme E2W.
    
 0.746
Esi_0079_0034
AAA domain-containing protein.
    
 0.746
Esi_0128_0064
Guanylyl cyclase.
    
 0.746
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.