STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOP2DNA topoisomerase II. (1809 aa)    
Predicted Functional Partners:
Esi_0393_0013
TOPEUc domain-containing protein.
   
 
 0.813
Esi_0393_0020
Topo_C_assoc domain-containing protein.
   
 
 0.813
Esi_0029_0113
Small ubiquitin-like modifier.
    
 0.795
Esi_0036_0023
Small ubiquitin-like modifier.
    
 0.795
Esi_0114_0045
Uncharacterized protein.
   
 
 0.760
Esi_0098_0002
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.751
Esi_0060_0047
Similar to retinoic acid induced 17, partial.
    
 0.741
Esi_0101_0095
SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2).
   
 
 0.730
Esi_0002_0285
SMC_N domain-containing protein.
   
 
 0.730
Esi_0000_0340
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.725
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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