STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOX1Lipoxygenase. (772 aa)    
Predicted Functional Partners:
Esi_0003_0200
Hypothetical leucine rich repeat protein.
    
 0.718
Esi_0034_0144
Hypothetical leucine rich repeat protein.
    
 0.718
Esi_0195_0008
CSD domain-containing protein.
    
 0.697
Esi_0002_0184
Hypothetical leucine rich repeat protein.
    
 0.696
Esi_0162_0064
Similar to SET domain, bifurcated 1.
    
 0.665
Esi_0000_0119
Transcription initiation factor TFIID subunit.
    
  0.643
Esi_0045_0042
Kinesin light chain.
    
 0.633
Esi_0012_0063
Transcription initiation factor TFIID subunit 6.
    
  0.632
Esi_0059_0095
Contains similarity to extensin (AtExt1) from Arabidopsis thaliana.
    
  0.631
Esi_0041_0035
Putative: centriole proteome protein [Chlamydomonas reinhardtii].
    
  0.617
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.