STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0455_0007Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
Esi_0264_0010
Uncharacterized protein.
   
   0.906
Esi_0055_0012
Uncharacterized protein.
    
   0.882
rps17
30S ribosomal protein S17, chloroplastic; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.732
Esi_0080_0094
Putative Ntdin.
   
   0.715
Esi_0228_0017
tRNA pseudouridine synthase.
    
   0.712
Esi_0330_0018
S-adenosyl-methyltransferase MraW.
    
   0.712
Esi_0070_0112
Uncharacterized protein.
    
   0.633
Esi_0177_0026
Uncharacterized protein.
    
   0.582
Esi_0131_0088
Ion_trans domain-containing protein.
    
   0.582
Esi_0020_0166
Haloacid dehalogenase-like hydrolase.
    
   0.582
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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