STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0050_0021Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
Esi_0004_0180
Di-trans-poly-cis-decaprenylcistransferase.
    
  0.467
Esi_0004_0181
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.467
Esi_0074_0092
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.467
CPC22
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
   0.441
FPPS
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
  0.422
SPPS
Solanesyl diphosphate synthase-like protein; Belongs to the FPP/GGPP synthase family.
  
 
  0.412
GGPPS1
Geranylgeranyl pyrophosphate synthetase, chloroplast.
  
 
  0.412
GGPPS1-2
Geranylgeranyl pyrophosphate synthase, chloroplast; Belongs to the FPP/GGPP synthase family.
  
 
  0.412
GPPS
Geranyl-diphosphate synthase.
  
 
  0.412
Esi_0264_0024
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
  0.403
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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