STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0504_0007Uncharacterized protein. (390 aa)    
Predicted Functional Partners:
Esi_0036_0078
Uncharacterized protein.
   
0.987
Esi_0032_0079
SKIP_SNW domain-containing protein.
   
 0.981
Esi_0089_0051
Uncharacterized protein.
   
 0.981
Aqr
Aquarius intron-binding protein similar to aquarius.
   
 0.980
Esi_0059_0049
Uncharacterized protein.
    
 0.980
Esi_0327_0008
Uncharacterized protein.
   
 0.979
Esi_0005_0154
Uncharacterized protein.
    
 0.979
Esi_0197_0055
Cyclophilin.
   
 0.963
Esi_0006_0055
Peptidyl-prolyl cis-trans isomerase E.
   
 0.963
Esi_0144_0016
MI domain-containing protein.
   
 
 0.956
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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