STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0051_0056Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
Esi_0000_0259
Uncharacterized protein.
     
 0.649
Esi_0162_0064
Similar to SET domain, bifurcated 1.
     
 0.639
Esi_0268_0001
Histone-lysine N-methyltransferase.
     
 0.546
Esi_0034_0078
DOT1 domain-containing protein.
     
 0.546
Esi_0007_0090
DOT1 domain-containing protein.
     
 0.546
Esi_0130_0017
RING-type domain-containing protein.
    
   0.405
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.