STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0051_0109ATP-binding cassette superfamily. (414 aa)    
Predicted Functional Partners:
Esi_0175_0008
Uncharacterized protein.
    
 0.561
ccsA
Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
    
  0.519
Esi_0195_0027
Uncharacterized protein.
  
 
  0.497
Esi_0127_0070
Uncharacterized protein.
    
 0.480
Esi_0532_0004
Uncharacterized protein.
  
  
 
0.450
Esi_0183_0030
SH2 domain containing protein.
   
 0.446
Esi_0183_0042
SH2 domain containing protein.
   
 0.446
Esi_0238_0007
ABC multidrug transporter.
  
 0.446
Esi_0238_0009
Multidrug Resistance associated Protein 1.
   
 0.446
Esi_0327_0005
Uncharacterized protein.
   
 0.446
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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