Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAT | Esi_0000_0281 | D7FVR8 | D8LB71 | Aspartate aminotransferase. | Glutamate synthase (Ferredoxin-dependent). | 0.629 |
AAT | Esi_0000_0452 | D7FVR8 | D8LBG9 | Aspartate aminotransferase. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.739 |
AAT | Esi_0292_0040 | D7FVR8 | D8LKC6 | Aspartate aminotransferase. | Uncharacterized protein. | 0.897 |
AAT | Esi_0349_0025 | D7FVR8 | D7FYP8 | Aspartate aminotransferase. | Glutamate synthase, N-terminal. | 0.629 |
AAT | Esi_1167_0001 | D7FVR8 | D7FI20 | Aspartate aminotransferase. | Ferredoxin-dependent glutamate synthase. | 0.629 |
AAT | GDH2 | D7FVR8 | D7G3Q6 | Aspartate aminotransferase. | Glutamate dehydrogenase 2 (NADP-dependent); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.847 |
AAT | GOGAT | D7FVR8 | D7FVE7 | Aspartate aminotransferase. | Glutamate synthase (NADH/NADPH-dependent). | 0.629 |
AAT | P5CS | D7FVR8 | D7G5M6 | Aspartate aminotransferase. | Delta-1-pyrroline-5-carboxylate synthase. | 0.454 |
Esi_0000_0281 | AAT | D8LB71 | D7FVR8 | Glutamate synthase (Ferredoxin-dependent). | Aspartate aminotransferase. | 0.629 |
Esi_0000_0281 | Esi_0000_0452 | D8LB71 | D8LBG9 | Glutamate synthase (Ferredoxin-dependent). | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.976 |
Esi_0000_0281 | Esi_0292_0040 | D8LB71 | D8LKC6 | Glutamate synthase (Ferredoxin-dependent). | Uncharacterized protein. | 0.643 |
Esi_0000_0281 | GDH2 | D8LB71 | D7G3Q6 | Glutamate synthase (Ferredoxin-dependent). | Glutamate dehydrogenase 2 (NADP-dependent); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.826 |
Esi_0000_0281 | GLURS | D8LB71 | D7FN57 | Glutamate synthase (Ferredoxin-dependent). | Glutamyl-tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.790 |
Esi_0000_0281 | GOGAT | D8LB71 | D7FVE7 | Glutamate synthase (Ferredoxin-dependent). | Glutamate synthase (NADH/NADPH-dependent). | 0.930 |
Esi_0000_0281 | P5CS | D8LB71 | D7G5M6 | Glutamate synthase (Ferredoxin-dependent). | Delta-1-pyrroline-5-carboxylate synthase. | 0.886 |
Esi_0000_0452 | AAT | D8LBG9 | D7FVR8 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Aspartate aminotransferase. | 0.739 |
Esi_0000_0452 | Esi_0000_0281 | D8LBG9 | D8LB71 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Glutamate synthase (Ferredoxin-dependent). | 0.976 |
Esi_0000_0452 | Esi_0292_0040 | D8LBG9 | D8LKC6 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Uncharacterized protein. | 0.810 |
Esi_0000_0452 | Esi_0349_0025 | D8LBG9 | D7FYP8 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Glutamate synthase, N-terminal. | 0.976 |
Esi_0000_0452 | Esi_1167_0001 | D8LBG9 | D7FI20 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Ferredoxin-dependent glutamate synthase. | 0.976 |
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