STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0540_0004Alpha-(1,6)-fucosyltransferase, family GT23. (458 aa)    
Predicted Functional Partners:
FucT
Alpha-(1,3)-fucosyltransferase, family GT10.
     
 0.755
B4GALT3
Beta-1,4-galactosyltransferase, family GT7.
     
 0.749
Esi_0111_0021
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54.
     
 0.686
DPAGT1
N-acetylglucosaminephosphotransferase.
   
 
 0.671
MAN2B1
Alpha-mannosidase.
     
 0.660
Tom70
Mitochondrial import receptor, Tom70 homolog.
     
 0.627
Esi_0007_0019
Uncharacterized protein.
     
 0.627
Esi_0057_0068
RING-type domain-containing protein.
    
 0.601
Esi_0162_0007
Glycosyltransferase.
     
 0.540
Esi_0300_0009
Putative ATP-dependent proteinase, possible LON protease.
     
 0.540
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.