STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0055_0019PlsC domain-containing protein. (651 aa)    
Predicted Functional Partners:
RAC
RAC, RHO family GTPase.
    
 0.710
Esi_0003_0200
Hypothetical leucine rich repeat protein.
    
 0.693
Esi_0034_0144
Hypothetical leucine rich repeat protein.
    
 0.693
Esi_0035_0139
Acyltransferase; Belongs to the membrane-bound acyltransferase family.
     
 0.617
Lipin
Lipn N.
    
 0.617
Esi_0031_0031
LNS2 domain-containing protein.
    
 0.617
Centrin
N/a.
    
 0.602
Esi_0047_0059
Centrin-1, putative.
    
 0.602
CMS
4-diphosphocytidyl-2C-methyl-D-erythritol synthase, chloroplast.
    
 0.602
Centrin-2
Centrin.
    
 0.602
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.