STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0055_0027Bms1-type G domain-containing protein. (840 aa)    
Predicted Functional Partners:
Esi_0302_0001
Uncharacterized protein.
   
 0.996
Esi_0036_0088
Uncharacterized protein.
   
 0.995
Esi_0000_0342
Uncharacterized protein; Belongs to the NOB1 family.
   
 0.994
Esi_0114_0059
KH domain-containing protein.
   
 0.989
Esi_0062_0109
RIO domain-containing protein.
   
 0.989
Esi_0159_0040
NUC173 domain-containing protein.
   
 
 0.986
Esi_0082_0004
Uncharacterized protein.
   
 0.981
Esi_0073_0071
KH type-2 domain-containing protein.
    
 0.971
Esi_0016_0192
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.970
Esi_0060_0102
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.970
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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