STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0552_0008Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (604 aa)    
Predicted Functional Partners:
Esi_0115_0033
Uncharacterized protein.
    
   0.863
Esi_0071_0063
Uncharacterized protein.
    
   0.863
Esi_0063_0102
Laminin IV type A domain-containing protein.
   
 
 0.741
Rad23
UV excision repair protein RAD23B homolog.
    
   0.738
Esi_0076_0031
Rad23b protein.
    
   0.738
Esi_0115_0028
FHA domain-containing protein.
    
 0.553
Esi_0010_0207
CASP_C domain-containing protein.
    
   0.473
Esi_0128_0045
Protein involved in intra-Golgi vesicle-mediated transport.
    
   0.473
Esi_0274_0001
Arsenite translocating ATPase like protein.
  
   0.424
Esi_0196_0051
Arsenical pump-driving ATPase (Partial).
  
   0.424
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.