STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0552_00164-hydroxybenzoate nonaprenyltransferase. (58 aa)    
Predicted Functional Partners:
GGR
Geranylgeranyl reductase geranylgeranyl diphosphate reductase geranylgeranyl hydrogenase.
  
 
 0.835
chlL
Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. Belongs to the NifH/BchL/ChlL family.
  
 
 0.764
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.745
Esi_0109_0085
Uncharacterized protein.
    
 0.729
COX10
COX10 homolog, cytochrome c oxidase assembly protein.
    
 0.727
atpB
ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 0.725
Esi_0327_0021
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.725
HPPD
4-hydroxyphenylpyruvate dioxygenase, plastid.
    
 0.715
Esi_0047_0063
D-lactate dehydrogenase, putative.
    
 0.712
HDS
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast.
    
 0.703
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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