STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0057_0114Smc-like protein. (1267 aa)    
Predicted Functional Partners:
Esi_0395_0012
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.981
Esi_0031_0122
Uncharacterized protein.
    
 0.980
Esi_0076_0113
MAGE domain-containing protein.
    
 0.968
Esi_0279_0040
AAA_23 domain-containing protein.
   
0.915
Esi_0309_0001
Uncharacterized protein.
   
0.915
Esi_0309_0003
AAA_23 domain-containing protein.
   
 0.915
Esi_0309_0007
Uncharacterized protein.
   
 0.915
Esi_0049_0100
annotation not available
   
 
 0.910
Esi_0014_0059
Structural maintenance of chromosomes protein.
   
 0.881
Esi_0114_0045
Uncharacterized protein.
   
 0.862
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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