STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0065_0084RRP7 domain-containing protein. (329 aa)    
Predicted Functional Partners:
Esi_0102_0055
Uncharacterized protein.
   
 0.999
Esi_0183_0061
U3 snoRNP-associated protein Utp7.
   
 0.998
Esi_0021_0005
KH domain-containing protein.
   
 0.998
Esi_0076_0077
Uncharacterized protein.
   
 0.998
Esi_0002_0233
Small nucleolar ribonucleoprotein U3 component.
   
 0.997
Esi_0018_0042
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.996
Esi_0029_0039
WD_REPEATS_REGION domain-containing protein.
   
 0.996
Esi_0344_0036
WD_REPEATS_REGION domain-containing protein.
   
 0.996
Bms1
Bms1, nucleolar GTPase involved in the ribosome assembly.
   
 0.996
Esi_0073_0067
Uncharacterized protein.
   
 0.996
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.