STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WD40-3WD40 domain containing protein. (1392 aa)    
Predicted Functional Partners:
Esi_0010_0146
Uncharacterized protein.
   
 
 0.897
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.897
Esi_0031_0072
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.618
Esi_0252_0032
Xylulose kinase.
    
 
 0.606
Esi_0453_0018
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.606
Esi_0455_0003
26S proteasome regulatory ATPase subunit; Belongs to the AAA ATPase family.
    
 
 0.606
Esi_0000_0648
AAA domain-containing protein.
    
 
 0.606
Esi_0131_0080
Glycerol kinase; Belongs to the FGGY kinase family.
    
 
 0.606
Esi_0141_0073
Carbohydrate kinase.
    
 
 0.606
Esi_0345_0026
Uncharacterized protein.
    
   0.404
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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