STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARIArginase; Belongs to the arginase family. (383 aa)    
Predicted Functional Partners:
OAT-2
Ornithine aminotransferase.
  
 0.987
OTC
Ornithine transcarbamoylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.917
ASL
Argininosuccinate lyase.
    
 0.911
FUMH
Fumarate hydratase (Fumarase).
 
   
 0.825
OCD
Ornithine cyclodeaminase.
  
 
 0.812
Esi_0476_0015
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
    
 0.788
P5CS
Delta-1-pyrroline-5-carboxylate synthase.
    
 0.783
POX
Proline dehydrogenase.
  
 
 0.775
Esi_0149_0059
Spermidine/spermine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.774
Esi_0244_0043
Spermidine/spermine synthase.
  
 
 0.774
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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