STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0073_0086RanBD1 domain-containing protein. (504 aa)    
Predicted Functional Partners:
Esi_0102_0031
Uncharacterized protein.
   
 0.999
Esi_0108_0009
Nup54 domain-containing protein.
   
 0.999
Esi_0136_0047
Uncharacterized protein.
   
 0.999
Esi_0159_0033
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.999
Esi_0018_0032
Uncharacterized protein.
   
 0.999
Esi_0018_0034
Uncharacterized protein.
   
 0.999
Esi_0219_0026
Nsp1_C domain-containing protein.
   
 0.999
Esi_0320_0024
Peptidase S59 domain-containing protein.
   
 0.999
Esi_0327_0033
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.999
Esi_0337_0012
Uncharacterized protein.
   
 0.999
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.