STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0075_0044Ferredoxin (Cyanobacterial type ferredoxin family). (502 aa)    
Predicted Functional Partners:
Esi_0036_0078
Uncharacterized protein.
    
 
 0.972
Esi_0025_0074
WD_REPEATS_REGION domain-containing protein.
    
   0.971
Esi_0089_0051
Uncharacterized protein.
    
   0.971
Esi_0005_0154
Uncharacterized protein.
    
   0.971
Esi_0045_0059
Uncharacterized protein.
   
 
 0.962
Esi_0032_0079
SKIP_SNW domain-containing protein.
    
 
 0.947
Esi_0037_0013
Similar to splicing factor Prp8.
    
   0.942
SmB
Small nuclear ribonucleoprotein-associated protein.
    
   0.941
Snu114
Snu114, GTPase of the U5 snRNP particle.
  
 0.934
Esi_0252_0007
WW domain, G-patch, C2H2 zinc finger.
    
 
 0.912
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.