STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNR8Soluble NSF Attachment Protein (SNAP) Receptor (SNARE). (224 aa)    
Predicted Functional Partners:
SNR16
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
    
 0.999
SNR20
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
   
 0.999
SNR10
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE); Belongs to the synaptobrevin family.
    
 0.994
Esi_0053_0015
Uncharacterized protein.
    
 0.986
SNR2
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE); Belongs to the synaptobrevin family.
    
 
 0.981
Esi_0007_0128
Similar to suppressor of ypt1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.981
SNR19
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
    
 0.980
SNR7
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
    
 0.980
Esi_0353_0008
Viral A-type inclusion protein.
    
 0.960
Esi_0063_0101
Vesicle docking protein P115.
    
 0.960
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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