STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0080_0071Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)    
Predicted Functional Partners:
Esi_0110_0046
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.999
Esi_0118_0023
Ribosomal_L14e domain-containing protein.
   
 0.999
Esi_0164_0030
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
Esi_0184_0026
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.999
Esi_0015_0162
Uncharacterized protein.
   
 0.999
Esi_0024_0173
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
Esi_0043_0040
Ribosomal_L7Ae domain-containing protein.
   
 0.999
Esi_0043_0146
Ribosomal protein rpl30.
   
 0.999
Esi_0052_0041
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.999
Esi_0062_0008
Ribosomal_L18_c domain-containing protein.
   
 0.999
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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