STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0817_0002USP domain-containing protein; Belongs to the peptidase C19 family. (323 aa)    
Predicted Functional Partners:
Esi_0752_0005
USP domain-containing protein; Belongs to the peptidase C19 family.
 
  
 
0.917
Esi_0320_0038
Uncharacterized protein; Belongs to the peptidase M16 family.
 
      0.874
Esi_0131_0026
SH3 domain-containing protein.
    
 0.874
Esi_0003_0116
Zinc finger, FYVE domain containing 19, isoform CRA_g.
   
 0.814
Esi_0302_0019
Similar to ubiquitin.
    
 0.755
Esi_0010_0201
Uncharacterized protein.
    
 0.755
Esi_0023_0071
Similar polyubiquitin.
    
 0.755
Esi_0031_0072
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.704
Esi_0095_0044
OTU domain-containing protein.
    
 0.693
Esi_0150_0046
Uncharacterized protein.
    
 0.658
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.