STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0085_0009tRNA (Guanine-N1)-methyltransferase domain containing protein. (338 aa)    
Predicted Functional Partners:
Esi_0053_0040
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.941
Esi_0196_0038
tRNA (Guanine-n(7)-)-methyltransferase complex subunit, putative.
   
 
 0.669
Esi_0149_0010
Uncharacterized protein.
   
  
 0.655
Esi_0017_0140
MATE efflux family protein subfamily, putative.
   
 0.637
Esi_0177_0055
PRORP domain-containing protein.
   
 0.637
Esi_0177_0056
PPR_long domain-containing protein.
   
 0.637
Esi_0018_0098
PRORP domain-containing protein.
   
 0.637
Esi_0018_0099
PRORP domain-containing protein.
   
 0.637
VDR
Uncharacterized protein.
   
 0.637
Esi_0282_0009
Uncharacterized protein.
   
 0.637
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.