STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0085_0029Uncharacterized protein. (374 aa)    
Predicted Functional Partners:
Esi_0090_0027
Bardet-Biedl syndrome 9, parathyroid hormone-responsive B1.
    
 0.870
BBS7
Bardet-Biedl syndrome protein 7.
    
 0.826
Esi_0057_0068
RING-type domain-containing protein.
    
 0.738
BBS8
BBS8, TPR Bardet-Biedl syndrome 8, Tetratricopeptide repeat domain 8 isoform B.
    
  0.737
BBS8-2
Bardet-Bield syndrome 8, Tetratricopeptide repeat domain 8 isoform B.
    
  0.737
Esi_0243_0031
N_BRCA1_IG domain-containing protein.
    
 0.732
Esi_0015_0112
N_BRCA1_IG domain-containing protein.
    
 0.732
Esi_0229_0023
UBX domain-containing protein.
    
  0.724
Esi_0347_0011
Acyl-CoA synthetase.
    
 0.700
BBS2
Bardet-Biedl syndrome 2.
    
 0.700
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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