STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0867_0001Similar to peroxisomal n1-acetyl-spermine/spermidine oxidase. (489 aa)    
Predicted Functional Partners:
Esi_0216_0042
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.727
Esi_0054_0059
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.727
Esi_0149_0059
Spermidine/spermine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.636
Esi_0244_0043
Spermidine/spermine synthase.
     
 0.636
Esi_0000_0445
Spermidine/spermine synthase.
     
 0.636
Esi_0076_0061
Amine oxidase.
     
 0.596
Esi_0076_0063
Amine oxidase.
     
 0.596
Esi_0076_0092
Uncharacterized protein.
     
 0.596
Esi_0308_0033
Aldehyde dehydrogenase.
    
  0.586
Esi_0451_0004
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.586
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.