STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0088_0039PDZ domain-containing protein. (398 aa)    
Predicted Functional Partners:
Sam50
Sorting and Assembly Machinery 50kDa protein (N-terminal).
  
  
 0.848
Esi_0145_0005
BZIP domain-containing protein.
     
 0.762
Esi_0211_0027
BZIP domain-containing protein.
     
 0.737
Esi_0004_0180
Di-trans-poly-cis-decaprenylcistransferase.
  
  
 0.575
Esi_0004_0181
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.575
Esi_0074_0092
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.575
Esi_0149_0059
Spermidine/spermine synthase; Belongs to the spermidine/spermine synthase family.
    
  0.535
Esi_0244_0043
Spermidine/spermine synthase.
    
  0.535
Esi_0000_0445
Spermidine/spermine synthase.
    
  0.535
Esi_0201_0035
GRIP domain-containing protein.
    
  0.514
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.