STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NADPH-4Putative respiratory burst oxidase homolog protein C-ter. (162 aa)    
Predicted Functional Partners:
RAC
RAC, RHO family GTPase.
    
 0.604
Esi_0194_0052
Ankyrin repeat domain 3.
    
 0.568
Esi_0004_0073
Similar to ankyrin 2,3/unc44.
    
 0.568
Esi_0394_0006
Uncharacterized protein.
     
 0.542
Esi_0107_0077
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
  0.538
PDK1-2
annotation not available
    
  0.538
Esi_0307_0002
Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform.
    
  0.538
Esi_0084_0023
Uncharacterized protein.
    
  0.538
Esi_0132_0056
Uncharacterized protein.
    
  0.538
Esi_0017_0207
PDZ domain-containing protein.
    
  0.499
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.