STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0089_0014Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
Esi_0446_0015
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
  
 0.842
iscA
Iron-sulfur assembly protein.
   
 0.834
Esi_0308_0013
Uncharacterized protein.
   
 0.834
ycf24
Uncharacterized protein ycf24.
  
 
 0.663
Esi_0038_0073
FeS assembly protein SufD.
  
 
 0.663
Esi_0147_0061
Iron-sulfur cluster assembly protein, similar to nifU.
  
 
 0.645
Esi_0212_0056
NifU-like protein 2, chloroplast (AtCNfu2) (AtCnfU-V).
  
 
 0.645
Esi_0000_0075
Nfu_N domain-containing protein.
  
 
 0.645
Esi_0207_0027
Glutaredoxin.
  
 0.619
Esi_0312_0018
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
   
 
 0.619
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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