STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0091_0086CNH domain-containing protein. (1234 aa)    
Predicted Functional Partners:
Esi_0226_0021
Uncharacterized protein.
   
 0.994
Esi_0010_0123
VPS11_C domain-containing protein.
   
 0.994
Esi_0406_0003
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.993
Esi_0228_0030
Vps16_N domain-containing protein.
   
 0.980
Esi_0228_0031
Vacuolar protein sorting vps16.
   
 0.980
Esi_0201_0032
Uncharacterized protein.
   
 0.977
Esi_0201_0033
Uncharacterized protein.
   
 0.977
Esi_0007_0227
Vps8 domain-containing protein.
   
 
 0.973
SNR10
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE); Belongs to the synaptobrevin family.
    
 
 0.937
SNR18
Soluble NSF Attachment Protein (SNAP) Receptor (SNARE).
   
 
 0.923
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.