STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0091_0089Methyltrans_SAM domain-containing protein. (244 aa)    
Predicted Functional Partners:
Esi_0147_0067
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.617
Esi_0094_0032
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
  0.617
Esi_0018_0114
Uncharacterized protein.
  
 
  0.588
Esi_0061_0095
Mur_ligase_M domain-containing protein.
  
 
  0.588
Esi_0046_0033
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
    
  0.582
ThiO
Glycine oxidase ThiO.
    
  0.582
Esi_0019_0094
Folate-binding protein YgfZ.
    
  0.582
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
  0.575
SHMT2-2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
  0.575
SHMT2-3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
  0.575
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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