STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0098_0014Possible vitamin K epoxide reductase, plastid protein. (320 aa)    
Predicted Functional Partners:
PsbO
Manganese stabilising protein.
  
 
 
 0.635
Esi_0040_0014
Uncharacterized protein.
  
  
  0.587
Esi_0201_0031
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family.
 
     0.537
Esi_0130_0035
Thylakoid lumenal protein.
  
 
 0.531
Esi_0008_0228
Uncharacterized protein.
  
    0.507
Esi_0133_0022
PAP fibrillin.
  
     0.477
CYN
Peptidyl-prolyl cis-trans isomerase.
 
     0.463
Esi_0003_0003
Uncharacterized protein.
  
     0.459
oec?
Thylakoid lumen 15.0 kDa protein.
  
     0.434
Esi_0080_0098
Uncharacterized protein.
  
     0.431
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.