STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0088ANK_REP_REGION domain-containing protein. (612 aa)    
Predicted Functional Partners:
Esi_0195_0008
CSD domain-containing protein.
   
  0.632
Esi_0073_0071
KH type-2 domain-containing protein.
    
  0.630
Esi_0003_0200
Hypothetical leucine rich repeat protein.
    
 0.628
Esi_0034_0144
Hypothetical leucine rich repeat protein.
    
 0.628
Esi_0102_0041
Myosin IIIA.
    
 0.620
FAP9
FAP9, Ras superfamily GTPase-like flagellar protein.
    
  0.604
IFT88
Intraflagellar transport particle protein.
   
  0.602
IFT52
Intrafragellar transpot 52, osm-6-like protein.
    
  0.601
Esi_0172_0051
Flagellar associated protein.
    
  0.601
Esi_0035_0142
Protein serine/threonine kinase.
    
 0.601
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.