STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0144Carbonic anhydrase alpha type. (295 aa)    
Predicted Functional Partners:
Esi_0062_0008
Ribosomal_L18_c domain-containing protein.
    
 
 0.921
Esi_0175_0012
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.889
Esi_0138_0011
Brix domain containing 1.
   
 
 0.869
Esi_0289_0009
Brix domain-containing protein.
   
    0.818
Esi_0017_0148
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.793
rpl5
50S ribosomal protein L5, chloroplastic; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit.
    
 
 0.774
Esi_0422_0017
WD_REPEATS_REGION domain-containing protein.
   
  
 0.752
Esi_0110_0003
PUM-HD domain-containing protein.
   
    0.746
Esi_0368_0022
Carbonic anhydrase.
    
 0.697
Esi_0062_0116
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.697
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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