STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0204WD_REPEATS_REGION domain-containing protein. (1015 aa)    
Predicted Functional Partners:
Esi_0159_0033
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.980
Esi_0212_0016
Uncharacterized protein.
    
 0.980
Esi_0327_0033
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.980
Esi_0279_0018
Uncharacterized protein.
    
 0.979
Esi_0096_0017
Uncharacterized protein.
    
 0.979
Esi_0210_0009
Uncharacterized protein.
    
 0.979
GTR2
GTR2, Ras superfamily GTPase.
   
 0.966
Esi_0764_0006
Uncharacterized protein.
    
 0.964
Esi_0011_0001
Zinc_ribbon_16 domain-containing protein.
    
 0.964
Esi_0137_0089
Uncharacterized protein.
    
 0.963
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.