STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0301Uncharacterized protein. (2227 aa)    
Predicted Functional Partners:
Esi_0115_0071
RING-type domain-containing protein.
    
  0.591
Esi_0123_0077
RING-type domain-containing protein.
    
  0.591
Esi_0133_0071
RING-type domain-containing protein.
    
  0.591
Esi_0002_0129
RING-type domain-containing protein.
    
  0.591
Esi_0338_0003
Ring finger protein.
    
  0.591
Esi_0339_0029
RING-type domain-containing protein.
    
  0.591
Esi_0051_0097
TPR repeat-containing protein.
    
  0.591
Esi_0075_0063
Similar to ring finger protein 167 isoform 1.
    
  0.591
Esi_0097_0009
RING-type domain-containing protein.
    
  0.591
Esi_0098_0071
RING-type domain-containing protein.
    
  0.591
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.