STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0308WD-40 repeat protein. (2802 aa)    
Predicted Functional Partners:
Esi_0046_0039
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.818
Esi_0049_0101
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.818
Esi_0079_0055
RING-type domain-containing protein.
    
 0.805
Esi_0079_0058
RING-type domain-containing protein.
    
 0.805
Esi_0134_0069
AAA domain-containing protein.
    
 0.798
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
    
 0.774
Esi_0135_0030
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.706
Esi_0135_0033
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.706
Esi_0245_0022
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.706
Esi_0282_0021
Similar to Cullin-1 (CUL-1) isoform 1; Belongs to the cullin family.
    
 0.706
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.