STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0524OmpA domain-containing protein. (2242 aa)    
Predicted Functional Partners:
Esi_0035_0030
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.688
Esi_0089_0086
Ipi1_N domain-containing protein.
    
 0.658
Esi_0003_0110
Uncharacterized protein.
    
 0.646
Esi_0074_0093
Uncharacterized protein.
    
 0.646
Esi_0088_0044
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.645
Esi_0207_0004
S-layer domain-containing protein.
    
 0.643
Esi_0229_0004
Uncharacterized protein.
    
 0.643
Esi_0029_0132
Uncharacterized protein.
    
 0.643
Esi_0338_0030
Uncharacterized protein.
   
 0.642
Esi_0067_0103
Uncharacterized protein.
   
 0.642
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.