STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0546Lipase. (383 aa)    
Predicted Functional Partners:
Esi_0020_0067
Diacylglycerol kinase.
     
 0.515
Esi_0012_0160
Putative lipase.
  
     0.475
Esi_0012_0136
Lipase, class 3.
  
     0.470
Esi_0012_0192
Lipase.
  
     0.468
Esi_0012_0137
Lipase.
  
     0.463
Esi_0187_0024
Pseudouridine synthase.
   
 
  0.457
RPUS-2
annotation not available
   
 
  0.457
Esi_0004_0227
S4 RNA-binding domain-containing protein.
   
 
  0.457
Esi_0012_0117
Lipase.
  
     0.410
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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