STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SdHExpressed protein. (479 aa)    
Predicted Functional Partners:
Esi_0053_0033
ETF domain-containing protein.
  
 0.974
Esi_0067_0048
ETF domain-containing protein.
  
 0.973
GGR
Geranylgeranyl reductase geranylgeranyl diphosphate reductase geranylgeranyl hydrogenase.
  
 
 0.861
ACAT3
Acetyl-CoA acetyltransferase subunit, putative mitochondrial presursor Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.797
ACAT2
Acetyl-CoA acetyltransferase, putative mitochondrial presursor; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.649
Esi_0387_0003
Uncharacterized protein.
  
 
 0.596
Esi_0063_0084
Isovaleryl-CoA dehydrogenase.
  
 
 0.596
Esi_0182_0007
Acyl-CoA dehydrogenase.
  
 
 0.593
Esi_0154_0047
Hydroxyacyl-Coenzyme A dehydrogenase.
  
  
 0.565
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
  
 0.549
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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